Overview Annotation GWAS Evidence Associated genes

P51628

Metabolite ID
P51628
Deionized mass
566.1076 Da
Average m/z
567.1152
Average RT
27.9905
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.268e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.983e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)4.774e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)5.268e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.268e-12
Glyma.12G007700 hypothetical protein NA 1Chr12:563263–567108 (-)7.892e-11
Glyma.13G080300 hypothetical protein AT1G77600:AT1G77600:ARM repeat superfamily protein 1Chr13:18678063–18702488 (-)2.038e-11
Glyma.15G106000 hypothetical protein AT4G21760:BGLU47:beta-glucosidase 47 1Chr15:8307131–8316135 (+)5.731e-13
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)2.14e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)1.652e-13
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)1.841e-11
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)6.063e-18
Glyma.20G086500 hypothetical protein NA 1Chr20:32219406–32222354 (-)5.133e-11