Overview Annotation GWAS Evidence Associated genes

P51587

Metabolite ID
P51587
Deionized mass
160.1239 Da
Average m/z
161.1311
Average RT
27.9605
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.792e-12
Glyma.13G062700 hypothetical protein AT3G01180:SS2:starch synthase 2 1Chr13:16045152–16059846 (-)5.349e-11
Glyma.13G062800 hypothetical protein AT5G48600:SMC3:structural maintenance of chromosome 3 1Chr13:16067222–16078901 (-)5.349e-11