Overview Annotation GWAS Evidence Associated genes

P51517

Metabolite ID
P51517
Deionized mass
387.2073 Da
Average m/z
388.2156
Average RT
27.8605
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G041200 hypothetical protein NA 2Chr17:3041792–3047638 (+)8.239e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)2.91e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)4.955e-11
Glyma.17G041000 hypothetical protein AT3G06950:AT3G06950:Pseudouridine synthase family protein 1Chr17:3025531–3029224 (+)8.653e-12
Glyma.17G041300 hypothetical protein NA 1Chr17:3066546–3073337 (+)8.653e-12