Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P51433

Metabolite ID
P51433
Deionized mass
198.1384 Da
Average m/z
199.1465
Average RT
27.8109
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)9.751e-15
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.629e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.863e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)2.985e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.704e-14
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 2Chr20:35468911–35474203 (+)5.19e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.705e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.806e-14
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)3.314e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.334e-12
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)9.147e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)5.222e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.629e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.629e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.554e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.704e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.704e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.704e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.704e-14
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)5.027e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.685e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.119e-12
Glyma.15G153400 hypothetical protein NA 1Chr15:12730592–12733439 (+)6.258e-11
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)6.23e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.023e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)2.921e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.533e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.863e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.471e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.471e-13
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)5.401e-11
Glyma.19G147000 hypothetical protein NA 1Chr19:40784257–40785271 (-)1.06e-11
Glyma.19G147100 hypothetical protein NA 1Chr19:40799107–40802473 (+)1.06e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)9.174e-11
Glyma.20G027600 hypothetical protein NA 1Chr20:3140862–3142270 (+)6.394e-11
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)9.078e-12
Glyma.20G098100 hypothetical protein AT1G56420:AT1G56420:antigenic heat-stable protein 1Chr20:34134555–34139100 (-)5.556e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)3.544e-11
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)2.532e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.161e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.539e-11
Glyma.20G107600 hypothetical protein NA 1Chr20:35025241–35029762 (+)7.988e-12
Glyma.20G107900 hypothetical protein NA 1Chr20:35044042–35046452 (-)8.439e-14
Glyma.20G108000 hypothetical protein NA 1Chr20:35047833–35051623 (-)1.1e-13
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)4.136e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)1.487e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.037e-17
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)1.073e-12