Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P51341

Metabolite ID
P51341
Deionized mass
413.2750 Da
Average m/z
414.2823
Average RT
27.7282
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G241200 hypothetical protein AT5G10320:AT5G10320:ATP synthase subunit B 2Chr11:33537120–33542455 (-)6.435e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.629e-11
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)4.931e-11
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)4.931e-11
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)4.931e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.911e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.089e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)1.263e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)1.263e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)1.502e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)3.713e-11
Glyma.09G065900 hypothetical protein NA 1Chr09:6419980–6421918 (+)2.576e-11
Glyma.09G066000 hypothetical protein NA 1Chr09:6431656–6439981 (-)2.576e-11
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 1Chr09:6475361–6486120 (+)2.576e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.573e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.999e-13
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)5.459e-15
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)3.211e-12
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)6.084e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)2.182e-13
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)2.816e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)8.375e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)5.613e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.736e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.129e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.129e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.129e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.129e-12
Glyma.11G154900 PRP3 NA 1Chr11:12643089–12645488 (+)4.835e-14
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)2.904e-12
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)2.49e-14
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)1.99e-12
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)5.51e-13
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)5.51e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.67e-11
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr12:35551596–35559129 (+)3.356e-12
Glyma.12G194000 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr12:35567230–35571578 (+)4.919e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.458e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.47e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)7.109e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)7.109e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.101e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.629e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.599e-17
Glyma.17G145900 hypothetical protein AT4G16820:PLA-I{beta]2:alpha/beta-Hydrolases superfamily protein 1Chr17:12027849–12029726 (+)1.316e-11
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)2.915e-11
Glyma.18G237300 hypothetical protein AT4G01320:ATSTE24:Peptidase family M48 family protein 1Chr18:52606766–52614841 (-)1.014e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.706e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.706e-11