Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P51034

Metabolite ID
P51034
Deionized mass
101.0476 Da
Average m/z
102.0547
Average RT
27.3908
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)4.912e-12
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 2Chr05:37029299–37037313 (+)2.635e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.695e-11
Glyma.15G107500 hypothetical protein NA 2Chr15:8435042–8443925 (+)2.609e-14
Glyma.16G055700 hypothetical protein AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily 2Chr16:5450641–5458545 (-)1.562e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)5.33e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)5.085e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.264e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.285e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.285e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.285e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)5.793e-13
Glyma.05G165200 hypothetical protein NA 1Chr05:35586701–35592272 (+)9.192e-12
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)9.192e-12
Glyma.05G166000 hypothetical protein NA 1Chr05:35657133–35657621 (-)9.192e-12
Glyma.05G166400 hypothetical protein NA 1Chr05:35692494–35699192 (+)3.824e-11
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)3.18e-11
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)3.18e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)2.182e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.799e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.626e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)2.903e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)3.23e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)3.23e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)3.23e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)3.23e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)2.508e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)5.071e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)5.071e-11
Glyma.06G285400 hypothetical protein AT1G06290:ACX3:acyl-CoA oxidase 3 1Chr06:47399250–47406151 (+)2.528e-11
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)9.231e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)8.387e-11
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 1Chr06:48253149–48265560 (+)9.946e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.695e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.975e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.975e-12
Glyma.15G107100 hypothetical protein NA 1Chr15:8394915–8402251 (-)7.861e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)5.144e-14
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)4.815e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.496e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)9.351e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)5.608e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.407e-11
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)5.219e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.432e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)2.19e-12