Overview Annotation GWAS Evidence Associated genes

P50972

Metabolite ID
P50972
Deionized mass
352.1457 Da
Average m/z
353.1537
Average RT
27.3059
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G216000 hypothetical protein AT3G27740:CARA:carbamoyl phosphate synthetase A 1Chr04:48723367–48726816 (-)1.979e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.992e-11
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)1.828e-11
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)1.828e-11
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)1.828e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.618e-12