Overview Annotation GWAS Evidence Associated genes

P50913

Metabolite ID
P50913
Deionized mass
237.1715 Da
Average m/z
238.1786
Average RT
27.2355
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)3.368e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)6.937e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)2.168e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.469e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.569e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.569e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.928e-15
Glyma.14G048200 hypothetical protein NA 1Chr14:3737773–3746209 (-)2.512e-11
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)3.368e-12
Glyma.16G058800 hypothetical protein AT5G57890:AT5G57890:Glutamine amidotransferase type 1 family protein__AT1G25155:AT1G24909:Glutamine amidotransferase ty… 1Chr16:5763908–5768668 (+)4.774e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)7.33e-12
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)4.975e-11
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)3.241e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)3.826e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)5.292e-14