Overview Annotation GWAS Evidence Associated genes

P50640

Metabolite ID
P50640
Deionized mass
544.3368 Da
Average m/z
545.3413
Average RT
27.0244
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G018100 hypothetical protein NA 2Chr07:1442368–1445430 (-)1.388e-12
Glyma.07G016700 hypothetical protein NA 1Chr07:1343519–1350422 (-)2.431e-12
Glyma.07G017300 hypothetical protein NA 1Chr07:1397047–1398526 (-)2.431e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.431e-12
Glyma.07G018200 hypothetical protein AT1G05385:LPA19:photosystem II 11 kDa protein-like protein 1Chr07:1455309–1457197 (-)2.431e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)1.388e-12
Glyma.07G018600 hypothetical protein AT3G16190:AT3G16190:Isochorismatase family protein 1Chr07:1481386–1484350 (+)5.314e-11
Glyma.07G018700 hypothetical protein NA 1Chr07:1491100–1494230 (+)5.314e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)6.808e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)3.231e-11