Overview Annotation GWAS Evidence Associated genes

P50626

Metabolite ID
P50626
Deionized mass
407.2979 Da
Average m/z
408.3042
Average RT
27.0154
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G200500 hypothetical protein AT5G51840:AT5G51840:junctophilin-like protein 2Chr16:36163525–36167913 (-)1.446e-12
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.72e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.72e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.486e-11
Glyma.16G200400 hypothetical protein NA 1Chr16:36151273–36155406 (+)1.446e-12
Glyma.16G200600 hypothetical protein AT5G51830:AT5G51830:pfkB-like carbohydrate kinase family protein 1Chr16:36173339–36177658 (-)1.446e-12