Overview Annotation GWAS Evidence Associated genes

P50490

Metabolite ID
P50490
Deionized mass
92.0618 Da
Average m/z
93.0693
Average RT
26.9572
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 2Chr14:23729201–23732285 (-)6.254e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.617e-12
Glyma.01G001300 hypothetical protein AT2G07050:CAS1:cycloartenol synthase 1 1Chr01:227021–237987 (-)2.314e-12
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)1.788e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)1.41e-13
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)1.691e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)7.534e-17
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)2.137e-14
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)2.138e-14
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)2.138e-14
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)6.057e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)4.171e-13
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)1.444e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.617e-12
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 1Chr14:32314092–32316626 (+)7.963e-11
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr14:32471354–32474446 (-)4.571e-14
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)6.789e-11