Overview Annotation GWAS Evidence Associated genes

P50288

Metabolite ID
P50288
Deionized mass
94.0776 Da
Average m/z
189.1614
Average RT
26.7591
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)2.438e-15
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)3.186e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)6.671e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)7.953e-11
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)8.413e-11
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)8.783e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.591e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.591e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.591e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.591e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.518e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.951e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)3.019e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.657e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)5.29e-11