Overview Annotation GWAS Evidence Associated genes

P50287

Metabolite ID
P50287
Deionized mass
464.3160 Da
Average m/z
465.3221
Average RT
26.7587
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G006000 hypothetical protein NA 2Chr10:596042–600044 (-)8.397e-14
Glyma.15G258300 hypothetical protein NA 2Chr15:48899412–48908116 (-)1.657e-12
Glyma.10G005300 hypothetical protein AT5G46050:PTR3:peptide transporter 3 1Chr10:535249–541722 (+)8.397e-14
Glyma.10G005400 hypothetical protein AT5G46040:AT5G46040:Major facilitator superfamily protein 1Chr10:545269–550554 (+)8.397e-14
Glyma.10G005900 hypothetical protein NA 1Chr10:593806–594296 (+)1.111e-11
Glyma.10G006500 hypothetical protein AT5G43330:c-NAD-MDH2:Lactate/malate dehydrogenase family protein 1Chr10:633423–637181 (+)8.397e-14
Glyma.10G008700 hypothetical protein AT1G04300:AT1G04300:TRAF-like superfamily protein 1Chr10:852171–865825 (-)3.288e-12
Glyma.10G008900 hypothetical protein NA 1Chr10:862816–863385 (+)3.288e-12
Glyma.10G009000 hypothetical protein NA 1Chr10:874061–876320 (-)3.288e-12
Glyma.15G257800 hypothetical protein NA 1Chr15:48777878–48788726 (-)4.985e-11
Glyma.16G200300 hypothetical protein NA 1Chr16:36137903–36140971 (+)2.142e-13