Overview Annotation GWAS Evidence Associated genes

P50242

Metabolite ID
P50242
Deionized mass
174.1393 Da
Average m/z
175.1465
Average RT
26.7375
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G186000 hypothetical protein NA 3Chr07:35356219–35362271 (-)4.156e-11
Glyma.03G142200 hypothetical protein AT3G47370:AT3G47370:Ribosomal protein S10p/S20e family protein 1Chr03:35800933–35802532 (+)4.187e-17
Glyma.08G190300 hypothetical protein NA 1Chr08:15286799–15291199 (-)2.675e-11
Glyma.08G190500 hypothetical protein NA 1Chr08:15312402–15323416 (-)2.675e-11
Glyma.08G191100 hypothetical protein NA 1Chr08:15361895–15363999 (-)2.675e-11
Glyma.08G191900 hypothetical protein AT3G13784:CWINV5:cell wall invertase 5 1Chr08:15431365–15437778 (-)2.675e-11
Glyma.08G192200 hypothetical protein AT3G13800:AT3G13800:Metallo-hydrolase/oxidoreductase superfamily protein 1Chr08:15457334–15462091 (+)2.675e-11
Glyma.18G214300 hypothetical protein NA 1Chr18:50116431–50117368 (+)3.184e-13