Overview Annotation GWAS Evidence Associated genes

P50149

Metabolite ID
P50149
Deionized mass
175.0864 Da
Average m/z
176.0934
Average RT
26.7137
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G130300 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 5Chr11:9925260–9936297 (-)1.154e-11
Glyma.11G130800 hypothetical protein AT5G12920:AT5G12920:Transducin/WD40 repeat-like superfamily protein 4Chr11:9983698–9993001 (-)1.154e-11
Glyma.02G137700 hypothetical protein AT3G59660:AT3G59660:C2 domain-containing protein / GRAM domain-containing protein 3Chr02:14232594–14257011 (-)2.145e-13
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 3Chr12:3949453–3957386 (-)3.693e-14
Glyma.12G074100 hypothetical protein AT3G45780:PHOT1:phototropin 1 3Chr12:5543485–5564378 (+)3.694e-14
Glyma.12G075000 hypothetical protein AT3G46200:NUDT9:nudix hydrolase homolog 9 3Chr12:5674766–5680512 (-)3.693e-14
Glyma.13G355400 hypothetical protein AT3G16290:EMB2083:AAA-type ATPase family protein 3Chr13:44396230–44403008 (+)3.195e-11
Glyma.17G129600 hypothetical protein AT3G48530:KING1:SNF1-related protein kinase regulatory subunit gamma 1 3Chr17:10379308–10386559 (+)2.145e-13
Glyma.12G054300 hypothetical protein NA 2Chr12:3927881–3930593 (+)3.693e-14
Glyma.12G054500 hypothetical protein NA 2Chr12:3938604–3943724 (+)3.694e-14
Glyma.12G054600 hypothetical protein NA 2Chr12:3946253–3949354 (+)3.693e-14
Glyma.12G055400 hypothetical protein NA 2Chr12:4015194–4020185 (-)3.693e-14
Glyma.12G055800 hypothetical protein NA 2Chr12:4043251–4045357 (-)3.693e-14
Glyma.12G073900 PRR3B NA 2Chr12:5508365–5522772 (+)3.694e-14
Glyma.13G355300 hypothetical protein AT3G16310:AT3G16310:mitotic phosphoprotein N' end (MPPN) family protein 2Chr13:44390574–44395551 (+)3.196e-11
Glyma.17G119500 hypothetical protein AT5G19960:AT5G19960:RNA-binding (RRM/RBD/RNP motifs) family protein 2Chr17:9452726–9457025 (+)5.123e-17
Glyma.17G123700 hypothetical protein AT5G23080:TGH:SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 2Chr17:9854879–9867310 (+)5.123e-17
Glyma.02G137400 hypothetical protein AT1G05710:AT1G05710:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr02:14214097–14219443 (+)2.145e-13
Glyma.11G129100 hypothetical protein NA 1Chr11:9808938–9810555 (+)1.154e-11
Glyma.11G130000 hypothetical protein NA 1Chr11:9895179–9897816 (+)1.154e-11
Glyma.11G130100 hypothetical protein NA 1Chr11:9899417–9903876 (+)1.154e-11
Glyma.11G179400 hypothetical protein AT5G22140:AT5G22140:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:24498542–24501682 (-)3.693e-14
Glyma.11G179500 hypothetical protein NA 1Chr11:24506209–24507702 (+)3.693e-14
Glyma.11G179600 hypothetical protein NA 1Chr11:24522179–24532007 (+)3.694e-14
Glyma.11G232900 hypothetical protein NA 1Chr11:32824430–32829570 (-)3.694e-14
Glyma.12G054800 hypothetical protein NA 1Chr12:3971274–3977675 (+)3.693e-14
Glyma.12G054900 hypothetical protein NA 1Chr12:3979297–3980162 (+)3.694e-14
Glyma.12G055000 hypothetical protein AT3G20810:JMJD5:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr12:3983716–3987833 (+)3.693e-14
Glyma.12G055200 hypothetical protein NA 1Chr12:3998947–3999707 (-)3.694e-14
Glyma.12G055300 hypothetical protein AT4G12070:AT4G12070:uncharacterized protein 1Chr12:4002494–4006611 (-)3.694e-14
Glyma.12G055600 hypothetical protein NA 1Chr12:4035828–4037173 (+)3.693e-14
Glyma.12G055900 hypothetical protein AT5G12950:AT5G12950:proline-tRNA ligase (DUF1680) 1Chr12:4048965–4055993 (-)3.694e-14
Glyma.12G059200 hypothetical protein NA 1Chr12:4284905–4287703 (-)3.693e-14
Glyma.12G059500 hypothetical protein NA 1Chr12:4303168–4304345 (+)3.694e-14
Glyma.12G059800 hypothetical protein AT1G07480:AT1G07480:Transcription factor IIA, alpha/beta subunit 1Chr12:4325044–4330012 (+)3.693e-14
Glyma.12G060400 hypothetical protein AT2G29190:PUM2:pumilio 2 1Chr12:4357044–4364291 (-)3.694e-14
Glyma.12G064100 hypothetical protein AT2G28800:ALB3:63 kDa inner membrane family protein 1Chr12:4713945–4723793 (+)3.694e-14
Glyma.12G073600 hypothetical protein NA 1Chr12:5488931–5490506 (+)3.694e-14
Glyma.12G074800 hypothetical protein AT3G46220:AT3G46220:E3 UFM1-protein ligase-like protein 1Chr12:5646423–5654810 (-)3.694e-14
Glyma.12G075100 hypothetical protein NA 1Chr12:5692181–5694308 (-)3.694e-14
Glyma.13G355100 hypothetical protein AT3G16330:AT3G16330:Avr9/Cf-9 rapidly elicited protein 1Chr13:44379189–44381793 (-)3.195e-11
Glyma.13G355600 hypothetical protein AT4G35420:DRL1:dihydroflavonol 4-reductase-like1 1Chr13:44407834–44409918 (-)3.195e-11
Glyma.13G356100 hypothetical protein AT3G16250:PnsB3:NDH-dependent cyclic electron flow 1 1Chr13:44445777–44447794 (-)3.195e-11
Glyma.13G356200 hypothetical protein AT3G16260:TRZ4:tRNAse Z4__AT1G52160:TRZ3:tRNAse Z3 1Chr13:44449158–44454494 (+)3.195e-11
Glyma.13G361800 hypothetical protein NA 1Chr13:44866362–44867785 (+)1.124e-15
Glyma.17G116100 hypothetical protein NA 1Chr17:9177090–9177898 (-)2.145e-13
Glyma.17G118300 hypothetical protein AT2G26650:KT1:K+ transporter 1 1Chr17:9362502–9369383 (+)5.123e-17
Glyma.17G119400 hypothetical protein NA 1Chr17:9422086–9440192 (-)5.124e-17
Glyma.17G120100 hypothetical protein AT2G26910:ABCG32:pleiotropic drug resistance 4 1Chr17:9514657–9525943 (-)5.124e-17
Glyma.17G120200 hypothetical protein AT5G19930:AT5G19930:integral membrane protein (Protein of unknown function DUF92, transmembrane) 1Chr17:9548001–9551319 (+)5.124e-17
Glyma.17G120300 hypothetical protein NA 1Chr17:9558276–9562317 (-)5.123e-17
Glyma.17G120500 hypothetical protein AT2G26890:GRV2:DNAJ heat shock N-terminal domain-containing protein 1Chr17:9587225–9604568 (-)5.123e-17
Glyma.17G120600 hypothetical protein NA 1Chr17:9607678–9611330 (-)5.123e-17
Glyma.17G120800 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr17:9619511–9629020 (-)5.124e-17
Glyma.17G121100 hypothetical protein AT1G73930:AT1G73930:polarity axis stabilization protein 1Chr17:9645970–9650703 (-)5.123e-17
Glyma.17G121400 DNA mismatch repair protein MSH2 AT3G18524:MSH2:MUTS homolog 2 1Chr17:9668479–9680085 (-)5.123e-17
Glyma.17G121600 hypothetical protein AT1G73960:TAF2:TBP-associated factor 2 1Chr17:9715404–9730191 (-)5.124e-17
Glyma.17G122300 TYRA-A arogenate dehydrogenase 2 AT5G34930:AT5G34930:arogenate dehydrogenase 1Chr17:9785932–9790153 (-)5.124e-17
Glyma.17G123500 hypothetical protein AT5G23100:AT5G23100:MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) 1Chr17:9844181–9845760 (-)5.123e-17
Glyma.17G124400 hypothetical protein NA 1Chr17:9928270–9933692 (+)5.123e-17
Glyma.17G125600 hypothetical protein NA 1Chr17:10016416–10019891 (-)2.145e-13
Glyma.17G129500 hypothetical protein NA 1Chr17:10375929–10379136 (-)2.145e-13
Glyma.17G129900 hypothetical protein NA 1Chr17:10407057–10408309 (+)2.145e-13
Glyma.17G130100 hypothetical protein AT4G09650:ATPD:F-type H+-transporting ATPase subunit delta 1Chr17:10417508–10419999 (-)2.145e-13
Glyma.17G130600 hypothetical protein NA 1Chr17:10459811–10461580 (+)2.145e-13
Glyma.17G136400 hypothetical protein AT4G22790:AT4G22790:MATE efflux family protein 1Chr17:11018767–11020308 (-)1.565e-15
Glyma.18G280300 hypothetical protein NA 1Chr18:56110850–56121368 (+)3.693e-14