Overview Annotation GWAS Evidence Associated genes

P50132

Metabolite ID
P50132
Deionized mass
553.4151 Da
Average m/z
554.4234
Average RT
26.7110
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G148400 hypothetical protein AT2G45710:AT2G45710:Zinc-binding ribosomal protein family protein 4Chr16:30901868–30903453 (+)3.182e-16
Glyma.06G076400 hypothetical protein AT5G10710:AT5G10710:centromere protein O 1Chr06:5905512–5912377 (-)3.183e-12
Glyma.16G148300 hypothetical protein NA 1Chr16:30894657–30897411 (-)2.156e-15
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.238e-11
Glyma.19G247800 hypothetical protein NA 1Chr19:49385792–49388122 (-)4.242e-11
Glyma.19G247900 hypothetical protein AT5G28910:AT5G28910:alpha-(1,6)-fucosyltransferase 1Chr19:49390605–49393975 (+)7.139e-11