Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P50115

Metabolite ID
P50115
Deionized mass
205.5847 Da
Average m/z
206.5915
Average RT
26.7072
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)7.78e-14
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)6.739e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)9.168e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)5.321e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.531e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.531e-11
Glyma.16G018000 hypothetical protein NA 2Chr16:1601748–1607341 (-)6.646e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 2Chr16:30652378–30659548 (+)1.847e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.541e-13
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)6.739e-14
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)1.212e-12
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)1.212e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)3.53e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.213e-14
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.114e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)8.579e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.163e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.661e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.661e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.661e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.661e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.661e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.661e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.661e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)1.262e-12
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 1Chr09:43361634–43365478 (-)3.986e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.399e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.287e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.287e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.287e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.287e-13
Glyma.11G171200 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 1Chr11:18475119–18484515 (+)3.33e-11
Glyma.11G171500 hypothetical protein NA 1Chr11:18629660–18631015 (+)3.33e-11
Glyma.11G171800 hypothetical protein NA 1Chr11:18663180–18666591 (-)3.33e-11
Glyma.11G172200 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 1Chr11:18702580–18708310 (+)3.33e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.413e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.413e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.531e-11
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 1Chr16:1208240–1214310 (-)5.419e-13
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 1Chr16:1222829–1228462 (-)5.419e-13
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)7.221e-18
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.752e-14
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)4.334e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)4.334e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)5.321e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)5.321e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.213e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.541e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.782e-11
Glyma.18G281800 hypothetical protein AT2G33550:AT2G33550:Homeodomain-like superfamily protein 1Chr18:56277508–56281665 (+)6.481e-11
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 1Chr19:860974–865476 (+)4.458e-11