Overview Annotation GWAS Evidence Associated genes

P49971

Metabolite ID
P49971
Deionized mass
412.2800 Da
Average m/z
413.2871
Average RT
26.6034
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 2Chr14:42298358–42306613 (-)1.819e-11
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 1Chr16:35625666–35634395 (-)2.1e-12
Glyma.16G194100 hypothetical protein NA 1Chr16:35633570–35637343 (+)2.1e-12
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)3.821e-12
Glyma.18G202600 FAD7-1 omega-3 fatty acid desaturase NA 1Chr18:48365045–48368299 (-)4.081e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)6.92e-11