Overview Annotation GWAS Evidence Associated genes

P49920

Metabolite ID
P49920
Deionized mass
633.4095 Da
Average m/z
634.4170
Average RT
26.5238
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
33
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

33 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)6.511e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)7.88e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.456e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)8.588e-11
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)6.199e-11
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)4.681e-11
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)4.681e-11
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)4.681e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.855e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.231e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.006e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.875e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.523e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)6.511e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)6.511e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.598e-13
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)3.784e-12
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)5.43e-11
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr07:6307073–6313498 (-)6.434e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.736e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)7.449e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)8.476e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)9.309e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.56e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)7.88e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.99e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.99e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)8.588e-11
Glyma.17G217900 hypothetical protein NA 1Chr17:36771760–36778616 (-)1.574e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.83e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.829e-11
Glyma.20G105400 hypothetical protein AT2G17010:AT2G17010:Mechanosensitive ion channel family protein 1Chr20:34796301–34808587 (+)4.071e-11
Glyma.20G105600 hypothetical protein AT2G17033:AT2G17033:pentatricopeptide (PPR) repeat-containing protein 1Chr20:34818550–34820435 (-)4.071e-11