Overview Annotation GWAS Evidence Associated genes

P49888

Metabolite ID
P49888
Deionized mass
360.2630 Da
Average m/z
361.2684
Average RT
26.4993
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G226300 hypothetical protein NA 5Chr18:51471540–51498344 (+)8.437e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.935e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)3.203e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.676e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.548e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.145e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.007e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.946e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.976e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.976e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.242e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.895e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)8.157e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.952e-12
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)5.063e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)2.196e-11