Overview Annotation GWAS Evidence Associated genes

P49886

Metabolite ID
P49886
Deionized mass
353.2593 Da
Average m/z
354.2682
Average RT
26.4944
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G146100 hypothetical protein AT3G12050:AT3G12050:Aha1 domain-containing protein 1Chr03:36146401–36147672 (-)2.561e-11
Glyma.03G146300 hypothetical protein AT2G41980:AT2G41980:Protein with RING/U-box and TRAF-like domain 1Chr03:36161959–36166525 (+)4.125e-11
Glyma.03G146400 hypothetical protein AT2G41970:AT2G41970:Protein kinase superfamily protein 1Chr03:36170481–36174029 (+)2.3e-13
Glyma.03G146500 hypothetical protein AT2G41960:AT2G41960:uncharacterized protein 1Chr03:36181312–36189521 (+)2.3e-13
Glyma.03G146600 hypothetical protein AT2G41950:AT2G41950:DNA-directed RNA polymerase subunit beta 1Chr03:36191841–36193872 (-)4.125e-11
Glyma.03G146700 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr03:36196552–36203201 (+)6.057e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)8.342e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.434e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.434e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.832e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.664e-12