Overview Annotation GWAS Evidence Associated genes

P49881

Metabolite ID
P49881
Deionized mass
390.2598 Da
Average m/z
391.2688
Average RT
26.4877
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.153e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.261e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)9.823e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.919e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.267e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.536e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.536e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.536e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.536e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.154e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.909e-11