Overview Annotation GWAS Evidence Associated genes

P49857

Metabolite ID
P49857
Deionized mass
391.3017 Da
Average m/z
392.3092
Average RT
26.4666
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.197e-12
Glyma.14G114100 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr14:13581722–13588412 (+)4.401e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.954e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)2.967e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)3.035e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)5.51e-11