Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49819

Metabolite ID
P49819
Deionized mass
370.2519 Da
Average m/z
371.2572
Average RT
26.4379
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 4Chr03:2202325–2234931 (+)1.814e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)7.735e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.069e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.779e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.779e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.746e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.07e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.766e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.766e-13
Glyma.02G107400 hypothetical protein NA 1Chr02:10245905–10246706 (-)5.73e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)6.503e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)6.074e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)5.102e-11
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 1Chr05:32446303–32473428 (+)4.874e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.018e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.373e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.373e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.373e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.799e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)7.672e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.069e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.069e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.069e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.069e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.31e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.141e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)9.435e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.562e-12
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)9.056e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.779e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.779e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.001e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)4.842e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)7.735e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)7.735e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)7.735e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)7.735e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.607e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.176e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.208e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.668e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.07e-12
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)6.03e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.578e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)1.658e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.564e-12
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)2.548e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.131e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.131e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.037e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.472e-11