Overview Annotation GWAS Evidence Associated genes

P49756

Metabolite ID
P49756
Deionized mass
493.2317 Da
Average m/z
494.2373
Average RT
26.3705
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)2.451e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)4.949e-12
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)4.722e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.81e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.904e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.88e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.904e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.904e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)3.524e-11
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)3.414e-13
Glyma.18G033800 hypothetical protein NA 1Chr18:2600457–2604130 (+)8.243e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)4.638e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)9.052e-14