Overview Annotation GWAS Evidence Associated genes

P49740

Metabolite ID
P49740
Deionized mass
1006.4987 Da
Average m/z
504.2572
Average RT
26.3580
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
35
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

35 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)9.427e-12
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 2Chr08:8296196–8307328 (-)3.087e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)2.949e-13
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)2.935e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)5.306e-12
Glyma.02G203400 hypothetical protein AT2G24240:AT2G24240:BTB/POZ domain with WD40/YVTN repeat-like protein__AT4G30940:AT4G30940:BTB/POZ domain with WD40/YVT… 1Chr02:38877987–38879327 (-)1.443e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)7.104e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)4.968e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.881e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)6.131e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)6.131e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)6.131e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)4.913e-11
Glyma.08G107700 RHG4 receptor-like kinase RHG4 NA 1Chr08:8284689–8288765 (+)7.128e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)3.087e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)1.214e-11
Glyma.11G137700 hypothetical protein AT1G07510:ftsh10:FTSH protease 10__AT2G29080:ftsh3:FTSH protease 3 1Chr11:10479343–10485155 (+)1.447e-12
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)2.229e-13
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)2.916e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)7.869e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.228e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.42e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.288e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.42e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.42e-14
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.181e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)9.262e-11
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)8.355e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.935e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.306e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)3.896e-12
Glyma.18G230600 hypothetical protein AT3G61250:MYB17:myb domain protein 17 1Chr18:51934101–51937216 (-)1.328e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.284e-14
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)1.044e-11
Glyma.20G152300 hypothetical protein NA 1Chr20:39117272–39119456 (+)4.662e-11