Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49207

Metabolite ID
P49207
Deionized mass
484.2839 Da
Average m/z
485.2916
Average RT
25.9271
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)2.209e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)6.677e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 2Chr11:9667918–9671917 (-)9.477e-15
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 2Chr16:30388030–30390647 (-)1.618e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)3.759e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.911e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.563e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)2.741e-15
Glyma.06G223300 hypothetical protein AT4G30860:SDG4:SET domain group 4 1Chr06:29529765–29549738 (+)7.864e-12
Glyma.06G224700 hypothetical protein NA 1Chr06:30524373–30529915 (-)7.864e-12
Glyma.08G094400 hypothetical protein AT1G18390:AT1G18390:Serine/Threonine kinase family catalytic domain protein 1Chr08:7174551–7178950 (-)7.612e-11
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)4.24e-11
Glyma.08G114600 hypothetical protein NA 1Chr08:8763388–8766206 (-)6.912e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.518e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)3.253e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.798e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.798e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.798e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.798e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.841e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.331e-11
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)2.703e-11
Glyma.11G126100 hypothetical protein AT1G08450:CRT3:calreticulin 3 1Chr11:9581659–9588340 (+)5.729e-11
Glyma.11G126800 hypothetical protein AT1G06050:AT1G06050:ENHANCED DISEASE RESISTANCE-like protein (DUF1336) 1Chr11:9647447–9649369 (+)7.643e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)9.477e-15
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)9.478e-15
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 1Chr11:25044939–25052549 (+)5.899e-11
Glyma.12G020600 hypothetical protein AT2G43360:BIO2:Radical SAM superfamily protein 1Chr12:1464530–1468876 (+)7.368e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.07e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.803e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.934e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.803e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.803e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.43e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.455e-12
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)2.934e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)2.33e-17
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.651e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.677e-12
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)6.995e-14
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.645e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)3.653e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.96e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.2e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.2e-12