Overview Annotation GWAS Evidence Associated genes

P49138

Metabolite ID
P49138
Deionized mass
106.0772 Da
Average m/z
107.0846
Average RT
25.8814
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G251000 hypothetical protein AT4G08290:UMAMIT20:nodulin MtN21 /EamA-like transporter family protein 1Chr04:51760822–51766080 (-)3.218e-11
Glyma.04G251200 hypothetical protein AT4G08280:AT4G08280:Thioredoxin superfamily protein 1Chr04:51802482–51807898 (-)3.218e-11
Glyma.04G252700 hypothetical protein AT1G77720:PPK1:putative protein kinase 1 1Chr04:51934937–51939413 (+)3.218e-11
Glyma.04G252900 hypothetical protein AT1G37150:HCS2:holocarboxylase synthetase 2__AT2G25710:HCS1:holocarboxylase synthase 1 1Chr04:51946270–51951849 (+)3.218e-11
Glyma.06G134000 hypothetical protein NA 1Chr06:11018982–11020060 (+)2.712e-11