P49098
Metabolite ID
P49098
Deionized mass
506.2609 Da
Average m/z
507.2737
Average RT
25.8469
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
99
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
99 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.01G045600 | hypothetical protein | NA | 3 | Chr01:5242432–5245038 (-) | 3.614e-12 | |
| Glyma.08G148300 | hypothetical protein | AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein | 3 | Chr08:11312041–11345534 (-) | 6.443e-12 | |
| Glyma.01G009300 | hypothetical protein | AT5G19690:STT3A:staurosporin and temperature sensitive 3-like A | 2 | Chr01:908484–917161 (+) | 6.45e-11 | |
| Glyma.03G251100 | hypothetical protein | AT3G04490:AT3G04490:exportin-4 protein | 2 | Chr03:44673965–44702804 (-) | 9.707e-11 | |
| Glyma.06G307900 | hypothetical protein | NA | 2 | Chr06:49664901–49674729 (+) | 6.921e-13 | |
| Glyma.08G148100 | hypothetical protein | AT1G78570:RHM1:rhamnose biosynthesis 1 | 2 | Chr08:11291040–11298606 (-) | 6.443e-12 | |
| Glyma.16G137600 | hypothetical protein | NA | 2 | Chr16:29468438–29472890 (-) | 6.004e-13 | |
| Glyma.17G211500 | hypothetical protein | AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein | 2 | Chr17:34916813–34922875 (+) | 2.525e-11 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 2.269e-11 | |
| Glyma.01G045400 | hypothetical protein | NA | 1 | Chr01:5140834–5144197 (-) | 4.25e-11 | |
| Glyma.01G045700 | hypothetical protein | AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… | 1 | Chr01:5265956–5271379 (-) | 4.43e-12 | |
| Glyma.01G099100 | hypothetical protein | NA | 1 | Chr01:33017228–33023840 (+) | 7.311e-11 | |
| Glyma.01G099600 | hypothetical protein | AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein | 1 | Chr01:33115843–33125726 (-) | 7.311e-11 | |
| Glyma.01G099900 | hypothetical protein | NA | 1 | Chr01:33275414–33282430 (+) | 7.311e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 3.56e-11 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 3.56e-11 | |
| Glyma.02G061700 | hypothetical protein | AT2G23450:AT2G23450:Protein kinase superfamily protein | 1 | Chr02:5577271–5582873 (-) | 3.477e-11 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 4.232e-13 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 2.436e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 7.885e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 1.701e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.355e-15 | |
| Glyma.04G014300 | hypothetical protein | AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein | 1 | Chr04:1101709–1106543 (+) | 3.624e-11 | |
| Glyma.04G014600 | hypothetical protein | NA | 1 | Chr04:1119108–1123175 (+) | 3.624e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 3.819e-13 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 7.385e-13 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 1 | Chr04:7187985–7192897 (+) | 8.981e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 3.493e-14 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 6.861e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.817e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.817e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.817e-11 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 1.027e-17 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 5.22e-14 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 3.387e-19 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 2.094e-12 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 2.094e-12 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 2.094e-12 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 2.706e-11 | |
| Glyma.06G275800 | hypothetical protein | AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta | 1 | Chr06:46677753–46682900 (-) | 5.79e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 1.988e-11 | |
| Glyma.08G147900 | hypothetical protein | AT5G09760:AT5G09760:Plant invertase/pectin methylesterase inhibitor superfamily | 1 | Chr08:11278955–11281587 (-) | 6.443e-12 | |
| Glyma.08G148500 | hypothetical protein | AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:11362991–11368184 (-) | 3.711e-16 | |
| Glyma.08G150300 | hypothetical protein | NA | 1 | Chr08:11550134–11555581 (+) | 9.226e-11 | |
| Glyma.08G199700 | hypothetical protein | AT5G50340:AT5G50340:DNA repair protein RadA-like protein | 1 | Chr08:16130591–16137703 (+) | 3.819e-14 | |
| Glyma.08G199800 | hypothetical protein | NA | 1 | Chr08:16137933–16142956 (-) | 3.819e-14 | |
| Glyma.08G199900 | hypothetical protein | AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit | 1 | Chr08:16146033–16151741 (+) | 3.819e-14 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 1.252e-11 | |
| Glyma.09G016800 | hypothetical protein | NA | 1 | Chr09:1300913–1311894 (+) | 4.421e-11 | |
| Glyma.09G133800 | hypothetical protein | NA | 1 | Chr09:33268295–33269240 (+) | 5.052e-13 | |
| Glyma.09G233700 | hypothetical protein | AT1G33430:AT1G33430:Galactosyltransferase family protein | 1 | Chr09:45632775–45635630 (-) | 7.469e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 2.477e-11 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 2.028e-13 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 4.374e-11 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 6.358e-13 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 6.358e-13 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 6.358e-13 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 6.358e-13 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 6.387e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 6.387e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 6.387e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 3.157e-12 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 3.157e-12 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 4.601e-16 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 4.601e-16 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 6.385e-11 | |
| Glyma.12G186200 | hypothetical protein | AT3G44350:NAC061:NAC domain containing protein 61 | 1 | Chr12:34708678–34710549 (+) | 6.482e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 1.514e-13 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 1.514e-13 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 2.99e-11 | |
| Glyma.13G067900 | hypothetical protein | NA | 1 | Chr13:16787469–16789119 (+) | 2.028e-11 | |
| Glyma.13G161900 | PAP25 | purple acid phosphatase | AT5G34850:PAP26:purple acid phosphatase 26 | 1 | Chr13:27748190–27752685 (-) | 5.842e-12 |
| Glyma.13G201600 | hypothetical protein | NA | 1 | Chr13:31521512–31522992 (+) | 5.472e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 8.403e-11 | |
| Glyma.13G319600 | hypothetical protein | AT5G22740:CSLA02:cellulose synthase-like A02 | 1 | Chr13:41398196–41403950 (-) | 2.487e-11 | |
| Glyma.14G004600 | hypothetical protein | AT5G48230:ACAT2:acetoacetyl-CoA thiolase 2 | 1 | Chr14:390064–394491 (+) | 6.384e-13 | |
| Glyma.14G094200 | hypothetical protein | AT5G11840:AT5G11840:YCF36, putative (DUF1230) | 1 | Chr14:8770378–8774149 (-) | 7.506e-14 | |
| Glyma.14G094300 | hypothetical protein | NA | 1 | Chr14:8771316–8772515 (+) | 7.506e-14 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 2.335e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 3.863e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 2.335e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 2.335e-12 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.863e-17 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 3.774e-14 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 5.934e-13 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 8.185e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 6.289e-12 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1 | Chr16:34364037–34367765 (-) | 3.769e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 3.052e-11 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 3.052e-11 | |
| Glyma.17G121800 | hypothetical protein | AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 | 1 | Chr17:9746590–9748712 (+) | 4.961e-11 | |
| Glyma.17G211600 | hypothetical protein | NA | 1 | Chr17:34925097–34929797 (+) | 1.582e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 1.911e-12 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 2.27e-11 | |
| Glyma.18G045000 | hypothetical protein | AT5G45130:RHA1:Ras small GTP-binding family protein | 1 | Chr18:3889384–3895138 (-) | 1.381e-11 | |
| Glyma.18G045500 | hypothetical protein | NA | 1 | Chr18:3942686–3943765 (-) | 9.029e-11 | |
| Glyma.18G055400 | hypothetical protein | NA | 1 | Chr18:4824726–4828902 (+) | 5.553e-11 | |
| Glyma.20G013100 | hypothetical protein | NA | 1 | Chr20:1134080–1135710 (-) | 2.767e-12 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 7.299e-14 |