Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49083

Metabolite ID
P49083
Deionized mass
362.2426 Da
Average m/z
363.2496
Average RT
25.8338
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)5.58e-12
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)3.36e-13
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)6.956e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)7.29e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.095e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.666e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.678e-12
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)3.894e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)1.9e-16
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)3.765e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)5.58e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)8.021e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.493e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.291e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.011e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.558e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.142e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1e-10
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.076e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.076e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)3.447e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)3.447e-12
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)3.116e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.371e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.516e-17
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.206e-16
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.206e-16
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.206e-16
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.206e-16
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)3.186e-13
Glyma.13G163400 hypothetical protein AT5G20350:TIP1:Ankyrin repeat family protein with DHHC zinc finger domain-containing protein 1Chr13:27861309–27869162 (+)1.476e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.001e-12
Glyma.14G084200 hypothetical protein NA 1Chr14:7375402–7379417 (-)1.395e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.666e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.678e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.65e-13
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)7.939e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)7.939e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)4.272e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.368e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.031e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.031e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)6.956e-11
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)3.887e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.542e-15
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)4.513e-15
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)3.746e-15
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)7.543e-13
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.365e-14