Overview Annotation GWAS Evidence Associated genes

P48923

Metabolite ID
P48923
Deionized mass
622.3499 Da
Average m/z
623.3583
Average RT
25.7166
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G009300 hypothetical protein AT1G65020:AT1G65020:plasma protein 2Chr11:646479–650889 (+)3.526e-16
Glyma.11G010800 hypothetical protein AT5G03415:DPB:Transcription factor DP 2Chr11:760054–766199 (-)3.759e-11
Glyma.02G135900 hypothetical protein NA 1Chr02:14086858–14097578 (-)4.747e-14
Glyma.02G139500 hypothetical protein NA 1Chr02:14477175–14481367 (+)3.975e-11
Glyma.02G190400 hypothetical protein NA 1Chr02:35805251–35808046 (+)3.019e-18
Glyma.02G192200 Purple acid phosphatase 16 AT3G10150:PAP16:purple acid phosphatase 16 1Chr02:36328821–36337010 (+)3.019e-18
Glyma.02G194200 hypothetical protein NA 1Chr02:36747224–36756569 (+)3.019e-18
Glyma.11G009900 hypothetical protein AT5G49530:AT5G49530:SIN-like family protein 1Chr11:699813–710152 (+)3.76e-11
Glyma.11G010500 hypothetical protein AT1G65060:4CL3:4-coumarate:CoA ligase 3 1Chr11:737013–741142 (+)3.76e-11
Glyma.11G010700 hypothetical protein AT2G31870:TEJ:Poly (ADP-ribose) glycohydrolase (PARG) 1Chr11:748685–755558 (+)3.759e-11