Overview Annotation GWAS Evidence Associated genes

P48605

Metabolite ID
P48605
Deionized mass
150.1030 Da
Average m/z
301.2133
Average RT
25.4517
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G211000 hypothetical protein AT3G58640:AT3G58640:Mitogen activated protein kinase kinase kinase-like protein 2Chr12:37000977–37014556 (-)1.015e-12
Glyma.02G055300 hypothetical protein NA 1Chr02:4997177–5000647 (+)1.84e-12
Glyma.06G105200 hypothetical protein AT1G78070:AT1G78070:Transducin/WD40 repeat-like superfamily protein 1Chr06:8409338–8414577 (-)3.397e-12
Glyma.10G051700 hypothetical protein NA 1Chr10:4642277–4644069 (+)8.808e-18
Glyma.12G210400 SGF14O 14-3-3 protein SGF14o AT2G42590:GRF9:ral regulatory factor 9 1Chr12:36943077–36946491 (-)1.015e-12
Glyma.12G210600 PEPC4 phosphoenolpyruvate carboxylase AT2G42600:PPC2:phosphoenolpyruvate carboxylase 2 1Chr12:36952133–36958451 (-)1.015e-12
Glyma.12G210900 hypothetical protein NA 1Chr12:36990154–36995394 (-)1.015e-12
Glyma.12G211200 hypothetical protein NA 1Chr12:37016358–37017036 (+)1.015e-12
Glyma.13G204800 hypothetical protein AT4G04640:ATPC1:ATPase, F1 complex, gamma subunit protein 1Chr13:31885462–31887911 (-)2.03e-11
Glyma.16G213100 hypothetical protein AT3G19180:PARC6:plastid division protein 1Chr16:37126159–37132422 (+)8.297e-12
Glyma.16G218100 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 1Chr16:37549733–37559243 (-)5.618e-12
Glyma.16G218300 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 1Chr16:37577485–37590025 (-)1.11e-14
Glyma.16G218600 hypothetical protein AT1G73400:AT1G73400:Pentatricopeptide repeat (PPR) superfamily protein 1Chr16:37603057–37606088 (+)7.257e-17