Overview Annotation GWAS Evidence Associated genes

P48574

Metabolite ID
P48574
Deionized mass
642.2612 Da
Average m/z
643.2685
Average RT
25.4239
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)4.354e-11
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.704e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)4.314e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)3.294e-14
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.101e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.485e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.972e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.571e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.833e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.833e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.915e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.657e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.81e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.779e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.37e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.37e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.37e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.37e-13
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)3.881e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.453e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.453e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.338e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.338e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.338e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.344e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.018e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.085e-14
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)8.111e-12
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)7.253e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)4.245e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)4.314e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)8.173e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)8.173e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)6.774e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.752e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.752e-14
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.595e-11
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)4.635e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.723e-11