Overview Annotation GWAS Evidence Associated genes

P48489

Metabolite ID
P48489
Deionized mass
92.0612 Da
Average m/z
185.1304
Average RT
25.3378
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)4.884e-12
Glyma.09G131400 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 1Chr09:32746011–32753923 (+)4.97e-11
Glyma.12G007500 hypothetical protein AT2G16430:PAP10:purple acid phosphatase 10 1Chr12:553730–557753 (+)5.907e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)7.755e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)5.501e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.719e-11