Overview Annotation GWAS Evidence Associated genes

P48475

Metabolite ID
P48475
Deionized mass
389.2892 Da
Average m/z
390.2966
Average RT
25.3327
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
1
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

1 gene linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G132800 HDL56 homeodomain-leucine zipper protein 56 AT4G40060:HB16:homeobox protein 16__AT2G22430:HB6:homeobox protein 6 1Chr08:10180949–10183209 (+)1.201e-12