Overview Annotation GWAS Evidence Associated genes

P48461

Metabolite ID
P48461
Deionized mass
528.3082 Da
Average m/z
529.3140
Average RT
25.3283
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G338900 hypothetical protein NA 2Chr08:45536950–45543029 (-)1.462e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.647e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.615e-12
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)4.585e-12
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)2.438e-13
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)2.237e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)2.237e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)2.237e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.121e-11
Glyma.04G124600 hypothetical protein NA 1Chr04:16329983–16332898 (-)7.341e-11
Glyma.08G338700 hypothetical protein NA 1Chr08:45527941–45529335 (-)7.286e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)6.253e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.11e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.268e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)1.268e-11
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr13:25483702–25502265 (+)6.809e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.647e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.615e-12
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)6.5e-11