Overview Annotation GWAS Evidence Associated genes

P48450

Metabolite ID
P48450
Deionized mass
369.2532 Da
Average m/z
370.2609
Average RT
25.3212
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)1.774e-11
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)1.686e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.577e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.199e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.988e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.515e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)8.274e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.546e-13
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.546e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.546e-13
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.448e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.394e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.288e-13
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.877e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.877e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)7.121e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)7.121e-11