Overview Annotation GWAS Evidence Associated genes

P48305

Metabolite ID
P48305
Deionized mass
236.2122 Da
Average m/z
237.2193
Average RT
25.1819
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G034000 hypothetical protein NA 1Chr03:3971585–3975700 (-)7.924e-12
Glyma.06G291300 hypothetical protein NA 1Chr06:48016841–48019943 (+)2.898e-14
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)5.836e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)6.961e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)5.836e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)5.836e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)6.961e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)4.973e-13
Glyma.06G293300 hypothetical protein AT4G28280:LLG3:LORELEI-LIKE-GPI ANCHORED PROTEIN 3 1Chr06:48198132–48201464 (-)3.309e-12
Glyma.06G296200 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr06:48521468–48527220 (+)8.255e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.038e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.038e-11