Overview Annotation GWAS Evidence Associated genes

P48240

Metabolite ID
P48240
Deionized mass
205.5844 Da
Average m/z
206.5913
Average RT
25.1263
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)2.688e-11
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)7.852e-15
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)2.91e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.301e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.301e-11
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)7.632e-13
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)7.632e-13
Glyma.02G111800 hypothetical protein AT1G69420:AT1G69420:DHHC-type zinc finger family protein 1Chr02:10808123–10814611 (-)1.691e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.37e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)5.797e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.264e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.652e-11
Glyma.16G137300 hypothetical protein NA 1Chr16:29435910–29441170 (-)4.196e-11
Glyma.16G159100 hypothetical protein NA 1Chr16:31889835–31894662 (+)6.672e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)9.991e-11