Overview Annotation GWAS Evidence Associated genes

P48065

Metabolite ID
P48065
Deionized mass
626.2722 Da
Average m/z
627.2787
Average RT
25.0700
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G241500 hypothetical protein AT1G45207:AT1G45207:Remorin family protein 3Chr17:39721566–39726711 (-)4.571e-16
Glyma.07G184300 hypothetical protein AT5G09590:MTHSC70-2:mitochondrial HSO70 2 2Chr07:35187421–35190998 (+)9.126e-11
Glyma.05G045400 hypothetical protein NA 1Chr05:4030513–4036257 (-)3.387e-19
Glyma.06G304200 hypothetical protein AT1G04910:AT1G04910:O-fucosyltransferase family protein 1Chr06:49352555–49358511 (-)1.449e-11
Glyma.06G308200 hypothetical protein AT5G21990:TPR7:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:49692842–49697908 (+)9.126e-11
Glyma.07G080400 hypothetical protein AT2G42010:PLDBETA1:phospholipase D beta 1 1Chr07:7312327–7319873 (-)9.126e-11
Glyma.13G194300 hypothetical protein NA 1Chr13:30742527–30743438 (+)9.993e-11
Glyma.13G194500 hypothetical protein NA 1Chr13:30763823–30769223 (+)9.993e-11
Glyma.13G195800 hypothetical protein AT3G54390:AT3G54390:sequence-specific DNA binding transcription factor 1Chr13:30928265–30932209 (-)1.49e-15
Glyma.17G239600 hypothetical protein NA 1Chr17:39512498–39518671 (+)7.093e-12
Glyma.17G241600 hypothetical protein NA 1Chr17:39731696–39732295 (-)4.571e-16
Glyma.17G241900 hypothetical protein NA 1Chr17:39751016–39754552 (+)4.571e-16
Glyma.17G242000 hypothetical protein AT5G09890:AT5G09890:Protein kinase family protein 1Chr17:39757510–39764133 (+)4.571e-16
Glyma.17G242500 hypothetical protein AT4G33330:PGSIP3:plant glycogenin-like starch initiation protein 3 1Chr17:39824928–39830495 (-)4.241e-12