Overview Annotation GWAS Evidence Associated genes

P47998

Metabolite ID
P47998
Deionized mass
132.0544 Da
Average m/z
133.0610
Average RT
25.0310
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.819e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.594e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.594e-13
Glyma.13G062200 hypothetical protein AT5G15270:AT5G15270:RNA-binding KH domain-containing protein 1Chr13:15985083–15991185 (-)5.043e-11
Glyma.13G062500 hypothetical protein NA 1Chr13:16016181–16019533 (-)5.043e-11
Glyma.13G062700 hypothetical protein AT3G01180:SS2:starch synthase 2 1Chr13:16045152–16059846 (-)1.203e-11
Glyma.13G062800 hypothetical protein AT5G48600:SMC3:structural maintenance of chromosome 3 1Chr13:16067222–16078901 (-)1.203e-11
Glyma.14G063600 hypothetical protein AT5G05840:AT5G05840:replication factor C subunit, putative (DUF620) 1Chr14:5163603–5167769 (+)3.245e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)6.296e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.595e-11
Glyma.16G167500 hypothetical protein NA 1Chr16:32707122–32710495 (+)6.62e-11