Overview Annotation GWAS Evidence Associated genes

P47956

Metabolite ID
P47956
Deionized mass
162.1032 Da
Average m/z
325.2138
Average RT
24.9998
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G289600 hypothetical protein AT5G51740:AT5G51740:Peptidase family M48 family protein 1Chr06:47831855–47835534 (-)6.753e-11
Glyma.06G289900 hypothetical protein AT2G20590:AT2G20590:Reticulon family protein 1Chr06:47861573–47865518 (-)9.231e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)9.864e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)6.868e-11