Overview Annotation GWAS Evidence Associated genes

P47884

Metabolite ID
P47884
Deionized mass
390.2372 Da
Average m/z
391.2430
Average RT
24.9694
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.547e-14
Glyma.09G183800 hypothetical protein AT3G18370:ATSYTF:C2 domain-containing protein 1Chr09:40890646–40898085 (+)1e-12
Glyma.14G038100 hypothetical protein NA 1Chr14:2853746–2854087 (+)2.547e-14
Glyma.14G056600 hypothetical protein NA 1Chr14:4512854–4521000 (+)4.815e-11
Glyma.18G074700 hypothetical protein AT5G55960:AT5G55960:transmembrane protein C9orf5 protein 1Chr18:7079711–7082929 (-)9.835e-11