Overview Annotation GWAS Evidence Associated genes

P47524

Metabolite ID
P47524
Deionized mass
316.2019 Da
Average m/z
633.4099
Average RT
24.8067
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
29
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

29 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 2Chr06:50586679–50589765 (+)5.597e-14
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)1.05e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.535e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.876e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.348e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.001e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.552e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.61e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.819e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.496e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.101e-11
Glyma.06G313800 hypothetical protein AT4G22900:AT4G22900:transmembrane protein, putative (DUF1191) 1Chr06:50252624–50254647 (+)5.527e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.209e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)2.069e-14
Glyma.06G324300 GmCSyGT1 NA 1Chr06:51189321–51193954 (-)1.249e-12
Glyma.08G198800 hypothetical protein AT4G29990:AT4G29990:Leucine-rich repeat transmembrane protein kinase protein 1Chr08:16038744–16049943 (-)1.383e-12
Glyma.08G199200 hypothetical protein NA 1Chr08:16085918–16090408 (+)5.645e-14
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)3.077e-13
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)3.077e-13
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)3.077e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.329e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.329e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.329e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.329e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)3.151e-11
Glyma.12G018000 hypothetical protein NA 1Chr12:1252709–1256330 (-)2.697e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)4.981e-11
Glyma.13G185300 hypothetical protein AT5G04990:SUN1:SAD1/UNC-84 domain protein 1__AT3G10730:SUN2:SAD1/UNC-84 domain protein 2 1Chr13:29926876–29931324 (+)2.651e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.283e-11