Overview Annotation GWAS Evidence Associated genes

P47454

Metabolite ID
P47454
Deionized mass
436.2481 Da
Average m/z
437.2567
Average RT
24.7643
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G224000 hypothetical protein AT4G11160:AT4G11160:Translation initiation factor 2, small GTP-binding protein 2Chr19:47620374–47625859 (+)4.2e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.982e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.662e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.668e-14
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)9.259e-14
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.902e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.384e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.384e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.384e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.384e-12
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 1Chr13:26321941–26324172 (+)4.876e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.298e-11
Glyma.19G219600 hypothetical protein NA 1Chr19:47187573–47188318 (-)4.871e-11
Glyma.19G222200 hypothetical protein NA 1Chr19:47439424–47441508 (+)1.871e-11
Glyma.19G223300 hypothetical protein AT4G01610:AT4G01610:Cysteine proteinases superfamily protein__AT1G02305:AT1G02305:Cysteine proteinases superfamily prot… 1Chr19:47559538–47565331 (-)4.2e-11
Glyma.19G224100 hypothetical protein NA 1Chr19:47626692–47629861 (+)4.2e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.343e-11