Overview Annotation GWAS Evidence Associated genes

P47452

Metabolite ID
P47452
Deionized mass
550.2717 Da
Average m/z
551.2795
Average RT
24.7631
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
33
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

33 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G134900 hypothetical protein AT1G02260:AT1G02260:Divalent ion symporter 3Chr09:33603656–33611229 (+)6.869e-11
Glyma.09G135900 hypothetical protein NA 3Chr09:33790317–33796452 (-)6.869e-11
Glyma.05G166700 hypothetical protein AT5G56460:AT5G56460:Protein kinase superfamily protein 2Chr05:35721957–35729547 (+)4.451e-16
Glyma.09G135800 hypothetical protein NA 2Chr09:33771104–33777806 (+)6.869e-11
Glyma.09G138100 hypothetical protein AT3G48990:AAE3:AMP-dependent synthetase and ligase family protein 2Chr09:34351919–34356555 (+)6.869e-11
Glyma.09G143300 hypothetical protein NA 2Chr09:35613188–35626304 (+)6.869e-11
Glyma.20G011000 hypothetical protein NA 2Chr20:925425–930493 (-)4.569e-11
Glyma.05G158300 hypothetical protein NA 1Chr05:35038288–35046498 (-)4.165e-13
Glyma.05G166900 hypothetical protein NA 1Chr05:35735957–35739484 (-)6.775e-11
Glyma.09G135100 hypothetical protein NA 1Chr09:33653882–33661656 (+)6.869e-11
Glyma.09G135700 hypothetical protein NA 1Chr09:33747320–33758130 (-)6.869e-11
Glyma.09G136200 hypothetical protein NA 1Chr09:33812072–33814621 (-)6.869e-11
Glyma.09G136900 hypothetical protein AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 1Chr09:33874840–33895062 (+)6.869e-11
Glyma.09G138200 hypothetical protein NA 1Chr09:34365946–34368132 (+)6.869e-11
Glyma.09G138300 hypothetical protein NA 1Chr09:34373735–34384854 (-)6.869e-11
Glyma.09G138400 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr09:34389300–34393011 (-)6.869e-11
Glyma.09G139100 hypothetical protein NA 1Chr09:34575886–34580118 (+)6.869e-11
Glyma.09G140700 hypothetical protein NA 1Chr09:34931671–34933828 (-)6.869e-11
Glyma.09G141400 hypothetical protein NA 1Chr09:35132255–35145867 (-)6.869e-11
Glyma.09G141600 hypothetical protein NA 1Chr09:35228993–35232511 (-)6.869e-11
Glyma.09G141800 hypothetical protein NA 1Chr09:35300834–35309693 (-)6.869e-11
Glyma.09G142800 hypothetical protein NA 1Chr09:35509959–35511342 (+)6.869e-11
Glyma.09G143400 hypothetical protein NA 1Chr09:35645408–35647240 (-)6.869e-11
Glyma.09G143600 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr09:35656881–35664179 (-)6.869e-11
Glyma.09G143900 hypothetical protein NA 1Chr09:35766919–35772491 (-)6.869e-11
Glyma.09G180800 hypothetical protein AT3G18260:AT3G18260:Reticulon family protein 1Chr09:40574739–40579272 (-)9.592e-12
Glyma.09G184900 hypothetical protein AT1G51740:SYP81:syntaxin of plants 81 1Chr09:41002131–41005811 (+)1.146e-20
Glyma.20G010100 hypothetical protein AT5G39710:EMB2745:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:872822–877464 (+)2.468e-13
Glyma.20G010600 hypothetical protein AT5G13770:AT5G13770:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr20:896859–900923 (-)2.468e-13
Glyma.20G010900 hypothetical protein NA 1Chr20:919194–923000 (-)2.468e-13
Glyma.20G011300 hypothetical protein NA 1Chr20:942440–943347 (-)4.569e-11
Glyma.20G011700 hypothetical protein AT5G08520:AT5G08520:Duplicated homeodomain-like superfamily protein 1Chr20:974511–985182 (-)4.569e-11
Glyma.20G011800 hypothetical protein AT1G68090:ANN5:annexin 5 1Chr20:987123–993731 (+)4.569e-11