Overview Annotation GWAS Evidence Associated genes

P47286

Metabolite ID
P47286
Deionized mass
387.2451 Da
Average m/z
388.2503
Average RT
24.6472
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G188300 hypothetical protein NA 4Chr02:35008552–35027979 (-)8.097e-14
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)3.627e-12
Glyma.02G186700 hypothetical protein AT2G41530:SFGH:S-formylglutathione hydrolase 1Chr02:34053264–34063869 (+)5.66e-11
Glyma.02G186800 hypothetical protein AT5G20950:AT5G20950:Glycosyl hydrolase family protein 1Chr02:34273084–34276697 (+)5.66e-11
Glyma.02G187900 hypothetical protein NA 1Chr02:34766792–34767584 (-)5.66e-11
Glyma.02G188000 hypothetical protein NA 1Chr02:34824517–34828786 (+)5.66e-11
Glyma.02G189300 hypothetical protein NA 1Chr02:35303379–35311640 (+)5.66e-11
Glyma.02G189700 hypothetical protein NA 1Chr02:35649728–35657614 (-)5.66e-11
Glyma.02G191500 hypothetical protein AT3G10160:DFC:DHFS-FPGS homolog C 1Chr02:36167451–36184853 (-)5.66e-11
Glyma.03G036600 hypothetical protein NA 1Chr03:4432910–4435002 (-)4.32e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)8.592e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.357e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.357e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.755e-16
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.056e-12
Glyma.16G196000 hypothetical protein NA 1Chr16:35747398–35749949 (+)1.377e-11