Overview Annotation GWAS Evidence Associated genes

P47237

Metabolite ID
P47237
Deionized mass
568.2308 Da
Average m/z
285.1255
Average RT
24.6357
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G100400 hypothetical protein AT5G23150:HUA2:Tudor/PWWP/MBT domain-containing protein__AT5G08230:AT5G08230:tudor/PWWP/MBT domain protein 1Chr11:7605906–7620986 (+)4.65e-11
Glyma.11G100800 hypothetical protein AT5G23120:HCF136:photosystem II stability/assembly factor, chloroplast (HCF136) 1Chr11:7629148–7632965 (-)4.09e-12
Glyma.11G100900 hypothetical protein NA 1Chr11:7637952–7641989 (+)4.09e-12
Glyma.11G101000 hypothetical protein NA 1Chr11:7640724–7641407 (+)4.09e-12