Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47219

Metabolite ID
P47219
Deionized mass
162.1393 Da
Average m/z
163.1464
Average RT
24.6271
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)2.078e-15
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.668e-16
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)9.735e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)5.55e-11
Glyma.06G305300 hypothetical protein NA 2Chr06:49431590–49435985 (-)2.668e-16
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.419e-17
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.409e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.169e-12
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)3.554e-11
Glyma.02G290800 hypothetical protein AT5G07470:PMSR3:peptidemethionine sulfoxide reductase 3 1Chr02:47032515–47036279 (-)1.676e-11
Glyma.02G291200 hypothetical protein NA 1Chr02:47062620–47065072 (-)1.676e-11
Glyma.02G292200 hypothetical protein AT3G20475:MSH5:MUTS-homologue 5 1Chr02:47125531–47139234 (-)5.336e-13
Glyma.02G292500 hypothetical protein AT5G55070:AT5G55070:Dihydrolipoamide succinyltransferase 1Chr02:47153091–47160573 (+)5.336e-13
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)6.464e-11
Glyma.02G294000 hypothetical protein NA 1Chr02:47237993–47240495 (+)4.655e-14
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)2.245e-12
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 1Chr02:47300149–47306133 (+)5.347e-11
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 1Chr02:47306160–47312036 (-)5.347e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)1.858e-12
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)1.858e-12
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)7.672e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)1.017e-14
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)1.017e-14
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)1.017e-14
Glyma.02G304100 hypothetical protein AT1G07380:AT1G07380:Neutral/alkaline non-lysosomal ceramidase 1Chr02:47925182–47931754 (+)6.59e-11
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)3.368e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)3.368e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)4.352e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.42e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)2.04e-12
Glyma.06G305100 hypothetical protein NA 1Chr06:49413291–49417661 (-)6.767e-14
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)5.346e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.668e-16
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)1.247e-11
Glyma.07G073100 hypothetical protein NA 1Chr07:6656839–6661250 (-)6.667e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.177e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.177e-11
Glyma.13G180300 hypothetical protein NA 1Chr13:29378090–29379784 (-)2.944e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)6.572e-14
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)1.307e-13
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)1.307e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.397e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.409e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.029e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.372e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.568e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)2.883e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)9.735e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.324e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.324e-13
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)5.55e-11