Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47125

Metabolite ID
P47125
Deionized mass
181.1169 Da
Average m/z
182.1240
Average RT
24.5399
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)1.636e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)1.293e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)9.786e-11
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)4.829e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.475e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.475e-11
Glyma.16G018000 hypothetical protein NA 2Chr16:1601748–1607341 (-)7.687e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 2Chr16:26057276–26069534 (+)1.414e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.777e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.494e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)1.034e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)1.224e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.901e-14
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.808e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.95e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.119e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)5.585e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)5.585e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)5.585e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)5.585e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)5.585e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)5.585e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)5.585e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)9.786e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.448e-12
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)1.65e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.65e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.563e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.213e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.318e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)5.188e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.297e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.03e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.554e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.554e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)5.634e-11
Glyma.08G220200 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr08:17889781–17898867 (+)4.803e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)5.579e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.58e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.58e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.475e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.918e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)6.772e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.839e-12
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)5.895e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)4.883e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)4.883e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)2.205e-11
Glyma.16G116300 hypothetical protein AT4G35570:HMGB5:high mobility group B5__AT2G17560:HMGB4:high mobility group B4 1Chr16:25905311–25906957 (-)6.348e-12
Glyma.16G117000 hypothetical protein NA 1Chr16:26140411–26140830 (+)2.773e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)2.708e-11
Glyma.16G208700 hypothetical protein AT5G26360:AT5G26360:TCP-1/cpn60 chaperonin family protein 1Chr16:36814752–36820289 (-)4.705e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)2.12e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.246e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.246e-12
Glyma.18G247000 hypothetical protein NA 1Chr18:53433846–53444848 (-)8.183e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)7.759e-12